BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035D12SP1|AL430053
(876 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1264 1721 0.0
>3x_Contig1264
Length = 6524
Score = 1721 bits (864), Expect = 0.0
Identities = 870/876 (99%)
Strand = Plus / Minus
Query: 1 gatctccattcaaaagtttactatggaatatcatcaaatgtgtattggttcattcgtact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4728 gatctccattcaaaagtttactatggaatatcatcaaatgtgtattggttcattcgtact 4669
Query: 61 ttatgtgttatatattccgggatttcgattggaaagctagccaccacatttctaccaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4668 ttatgtgttatatattccgggatttcgattggaaagctagccaccacatttctaccaatg 4609
Query: 121 atccactgaaaacagactagaatgamaattcgtaaagtgtcattgtttgttactggtagt 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 4608 atccactgaaaacagactagaatgaaaattcgtaaagtgtcattgtttgttactggtagt 4549
Query: 181 ttgtgtttctattatatgtttatgataacggtttgaatatgtaatataatcaaccacaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4548 ttgtgtttctattatatgtttatgataacggtttgaatatgtaatataatcaaccacaaa 4489
Query: 241 acgatgctttcagaaagttaaaaagttattttatagttatgtcgtttcattgtagtttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4488 acgatgctttcagaaagttaaaaagttattttatagttatgtcgtttcattgtagtttta 4429
Query: 301 tatttgaatccttgaaatttggtaaatttcgtttatmatctttcaatgacagcmtcagtg 360
|||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 4428 tatttgaatccttgaaatttggtaaatttcgtttataatctttcaatgacagcatcagtg 4369
Query: 361 aaagaagatgtggaagcagaaccacccaagtcaccagttctgttcttagcatcagaagcm 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4368 aaagaagatgtggaagcagaaccacccaagtcaccagttctgttcttagcatcagaagca 4309
Query: 421 atggtggtcaagacagccttttcaatcttgtcggcgtgttcagtcaaacccatgtggttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4308 atggtggtcaagacagccttttcaatcttgtcggcgtgttcagtcaaacccatgtggttc 4249
Query: 481 aacatcatgacagaggatagcmacaaggcagttgggttagccttgttttgaccagcaata 540
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4248 aacatcatgacagaggatagcaacaaggcagttgggttagccttgttttgaccagcaata 4189
Query: 541 tctggggcagaaccgtggacagcttcgaagatagaaacggtgtgaccmatgttagcggat 600
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4188 tctggggcagaaccgtggacagcttcgaagatagaaacggtgtgaccaatgttagcggat 4129
Query: 601 ggagtcaaacctagagaaccagcggacaaaccggagttcaaatcggacaagatatcaccg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4128 ggagtcaaacctagagaaccagcggacaaaccggagttcaaatcggacaagatatcaccg 4069
Query: 661 tacaagtttggacaaacgacaacgacatcatcgtaggcttctgggtgttggacagtcttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4068 tacaagtttggacaaacgacaacgacatcatcgtaggcttctgggtgttggacagtcttc 4009
Query: 721 aagacggtgttatctagcaattcagtttgtagttcgatgtcagggtattcagaagacaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4008 aagacggtgttatctagcaattcagtttgtagttcgatgtcagggtattcagaagacaat 3949
Query: 781 ttcttggcaacgtcaacgaacaaaccatcggccaatctttggatagtggatttgtgaaca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3948 ttcttggcaacgtcaacgaacaaaccatcggccaatctttggatagtggatttgtgaaca 3889
Query: 841 acaaggacctttgatctatcaacggctctagcgtat 876
||||||||||||||||||||||||||||||||||||
Sbjct: 3888 acaaggacctttgatctatcaacggctctagcgtat 3853
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6227
Number of Sequences: 1807
Number of extensions: 6227
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 876
length of database: 10,358,551
effective HSP length: 16
effective length of query: 860
effective length of database: 10,329,639
effective search space: 8883489540
effective search space used: 8883489540
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)